Fitness data for BPHYT_RS34635 in Burkholderia phytofirmans PsJN

50S ribosomal protein L21
SEED: COGs COG3558
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.0 -2.3 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -1.0 -1.8 compare
nitrogen source L-Phenylalanine (N) -1.0 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -3.4 compare
supernatant control Vogels_fungal_media 0.1X -0.8 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.8 -1.4 compare
phage 36hr PHYTO6 MOI 0.1 -0.8 -1.8 compare
nitrogen source L-Citrulline (N) -0.8 -2.1 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.7 -2.1 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.7 -2.5 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.7 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.7 +1.9 compare
carbon source L-Fucose (C) +0.7 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +0.8 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.7 +2.5 compare
phage 36hr PHYTO10 MOI 10 +0.7 +1.7 compare
carbon source Phenylacetic 5 mM (C) +0.9 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.0 +3.3 compare
nitrogen source L-Serine (N) +1.1 +2.2 compare