Fitness data for BPHYT_RS34525 in Burkholderia phytofirmans PsJN

carnitine dehydratase
SEED: L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage 24hr PHYTO3 MOI 10 -1.3 -3.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.1 -2.7 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.9 -2.7 compare
phage 24hr PHYTO3 MOI 10 -0.8 -2.7 compare
phage 36hr PHYTO6 MOI 1 -0.8 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.6 compare
phage 24hr PHYTO2 MOI 0.1 -0.8 -2.2 compare
phage 24hr PHYTO1 MOI 1 -0.7 -2.2 compare
phage 36hr PHYTO1 MOI 1 -0.7 -1.9 compare
nophagecontrol 36hr Phyto Lib only -0.7 -1.5 compare
phage 24hr PHYTO1 MOI 10 -0.7 -1.9 compare
phage 36hr PHYTO8 MOI 10 -0.7 -1.8 compare
nophagecontrol 24hr Phyto Lib Only -0.7 -1.3 compare
carbon source Phenylacetic 5 mM (C) -0.6 -1.0 compare
phage 36hr PHYTO11 MOI 1 -0.6 -1.6 compare
phage 24hr PHYTO4 MOI 0.1 -0.6 -2.1 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.6 -2.0 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.6 +1.5 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.7 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.3 compare