Fitness data for BPHYT_RS34440 in Burkholderia phytofirmans PsJN

serine--glyoxylate aminotransferase
SEED: Serine--glyoxylate aminotransferase (EC 2.6.1.45)
KEGG: alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 321 experiments or choose conditions

group condition fitness t score  
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.9 -4.3 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.8 -3.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.7 -1.8 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.0 compare
carbon source D-Galacturonic Acid (C) -0.5 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.6 compare
nutrient L-Histidine -0.4 -1.8 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.4 -2.1 compare
carbon source D-Fructose (C) +0.4 +1.6 compare
phage 36hr PHYTO8 MOI 10 +0.4 +2.9 compare
phage 24hr PHYTO3 MOI 1 +0.4 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.0 compare
phage 36hr PHYTO2 MOI 1 +0.5 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.9 compare
phage 36hr PHYTO1 MOI 10 +0.5 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +2.3 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.4 compare
motility outer cut, LB soft agar motility assay +0.5 +1.3 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +1.2 +1.0 compare