Fitness data for BPHYT_RS34205 in Burkholderia phytofirmans PsJN

pyridoxal-dependent decarboxylase
SEED: Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage 24hr PHYTO11 MOI 1 -1.0 -1.9 compare
phage 36hr PHYTO8 MOI 0.1 -0.9 -1.6 compare
phage 24hr PHYTO9 MOI 10 -0.8 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -1.8 compare
nitrogen source L-Isoleucine (N) -0.6 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.6 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.5 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -1.4 compare
phage 24hr PHYTO10 MOI 10 -0.5 -1.6 compare
phage P. phyto PHYTO2 MOI 1 +0.6 +1.5 compare
motility inner cut, LB soft agar motility assay +0.6 +1.3 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.6 +0.7 compare
phage 36hr PHYTO2 MOI 1 +0.6 +1.7 compare
phage 24hr PHYTO2 MOI 0.1 +0.6 +1.5 compare
phage 36hr PHYTO1 MOI 10 +0.6 +1.9 compare
phage P. phyto PHYTO2 MOI 0.1 +0.7 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.1 compare