Fitness data for BPHYT_RS34040 in Burkholderia phytofirmans PsJN

hypothetical protein
SEED: Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily
KEGG: pilus assembly protein CpaF

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source Tween 20 (C) -0.9 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.7 -1.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.7 -1.2 compare
phage 36hr PHYTO4 MOI 1 -0.7 -1.2 compare
carbon source Sebacic (C) +0.7 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +2.0 compare
phage 24hr PHYTO8 MOI 1 +0.7 +2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.7 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +2.4 compare
phage 36hr PHYTO7 MOI 0.1 +0.8 +2.1 compare
carbon source Dodecandioic (C) +0.9 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.9 +2.7 compare
motility outer cut, LB soft agar motility assay +0.9 +3.6 compare
phage 36hr PHYTO6 MOI 10 +0.9 +2.0 compare
phage P. phyto PHYTO2 MOI 1 +0.9 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +2.0 +1.3 compare