Fitness data for BPHYT_RS33785 in Burkholderia phytofirmans PsJN

glycogen debranching protein
SEED: Glycogen debranching enzyme (EC 3.2.1.-)
KEGG: glycogen operon protein GlgX

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -1.2 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -1.1 -2.4 compare
phage 24hr PHYTO3 MOI 10 -0.9 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -3.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -2.3 compare
carbon source Phenylacetic 5 mM (C) -0.7 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.7 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.6 compare
carbon source Malonic (C) +0.6 +2.0 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.6 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.7 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.4 compare
carbon source L-Glutamine (C) +0.7 +2.6 compare
motility outer cut, LB soft agar motility assay +0.7 +2.6 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB +0.7 +1.6 compare
phage 24hr PHYTO4 MOI 10 +0.7 +2.3 compare
carbon source succinate (C) +0.8 +2.1 compare
motility outer cut, LB soft agar motility assay +1.1 +3.5 compare