Fitness data for BPHYT_RS32880 in Burkholderia phytofirmans PsJN

alanine acetyltransferase
SEED: Ribosomal-protein-S5p-alanine acetyltransferase
KEGG: ribosomal-protein-alanine N-acetyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -3.5 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.1 -1.0 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -2.4 -1.5 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -2.2 -1.7 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -2.0 -0.8 compare
phage P. phyto corn MOI 1 -2.0 -1.3 compare
motility inner cut, LB soft agar motility assay -1.8 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.7 -1.0 compare
phage 36hr PHYTO8 MOI 0.1 -1.6 -1.3 compare
carbon source Protocatechuic Acid (C) -1.5 -1.2 compare
motility outer cut, LB soft agar motility assay -1.5 -1.2 compare
nitrogen source Uridine (N) -1.5 -1.1 compare
supernatant control Vogels_fungal_media; pH 5.5 +1.5 +1.6 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +1.8 +1.9 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +1.8 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.9 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +2.5 +2.2 compare
temperature LB 37C +2.9 +1.8 compare
temperature LB 37C +5.0 +1.7 compare