Fitness data for BPHYT_RS32445 in Burkholderia phytofirmans PsJN

sulfate ABC transporter substrate-binding protein
SEED: Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing
KEGG: formate dehydrogenase, alpha subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -2.4 compare
carbon source Phenylacetic 5 mM (C) -0.8 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -1.7 compare
phage 24hr PHYTO4 MOI 10 -0.6 -1.4 compare
carbon source Putrescine (C) -0.6 -3.3 compare
carbon source Protocatechuic Acid (C) -0.6 -2.1 compare
carbon source Suberic (C) -0.6 -1.7 compare
phage 24hr PHYTO8 MOI 1 -0.6 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.7 compare
vitamin With vitamins t2 -0.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.5 +1.7 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.5 +1.5 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 +0.5 +1.8 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.6 +1.8 compare
phage 36hr PHYTO7 MOI 0.1 +0.6 +2.0 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.7 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +2.0 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +0.9 +2.0 compare