Fitness data for BPHYT_RS32160 in Burkholderia phytofirmans PsJN

type IV secretion system protein VirB10
SEED: Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10)
KEGG: type IV secretion system protein VirB10

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
pH LB, pH4 -0.5 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.0 compare
phage 36hr PHYTO11 MOI 1 -0.5 -1.3 compare
supernatant control Vogels_fungal_media 0.1X -0.5 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.8 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.4 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.4 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.7 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB +0.4 +2.8 compare
carbon source D-Glucose (C) +0.4 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.0 compare
nitrogen source L-Proline (N) +0.5 +3.0 compare
nitrogen source L-Serine (N) +0.5 +2.3 compare
carbon source L-Phenylalanine (C) +0.5 +1.6 compare
carbon source Azelaic (C) +0.5 +3.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.5 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.5 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.3 compare