Fitness data for BPHYT_RS32145 in Burkholderia phytofirmans PsJN

type IV secretory pathway protein VirD4
SEED: Type IV secretion system protein VirD4
KEGG: type IV secretion system protein VirD4

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -1.3 -4.0 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -1.3 -4.9 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -1.3 -2.5 compare
carbon source Malonic (C) -1.2 -3.9 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.2 -2.8 compare
carbon source L-Asparagine (C) -1.1 -4.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days -1.1 -3.0 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.0 -2.4 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.9 -2.4 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.9 -2.4 compare
carbon source D-Glucose 20 mM (C) -0.8 -3.2 compare
phage 36hr PHYTO1 MOI 1 +0.8 +4.6 compare
phage 36hr PHYTO2 MOI 1 +0.8 +3.1 compare
nophagecontrol 36hr Phyto Lib Only +0.8 +4.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +3.1 compare
phage 24hr PHYTO11 MOI 1 +0.9 +4.1 compare
nophagecontrol 24hr Phyto Lib only +0.9 +3.9 compare
phage 36hr PHYTO3 MOI 1 +0.9 +4.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +2.7 compare
phage 24hr PHYTO9 MOI 0.1 +1.0 +5.2 compare