Fitness data for BPHYT_RS32010 in Burkholderia phytofirmans PsJN

DEAD/DEAH box helicase
SEED: Superfamily II DNA/RNA helicases, SNF2 family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 321 experiments or choose conditions

group condition fitness t score  
supernatant control Vogels_fungal_media; pH 5.5 -0.6 -2.9 compare
phage 24hr PHYTO6 MOI 10 -0.4 -2.3 compare
phage 36hr PHYTO10 MOI 10 -0.4 -2.3 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.6 compare
supernatant control Vogels_fungal_media 0.1X -0.3 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.3 -1.8 compare
nitrogen source NAG (N) -0.3 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.5 compare
carbon source Protocatechuic Acid (C) +0.3 +1.9 compare
carbon source Sebacic (C) +0.3 +2.1 compare
phage PHYTO3 MOI 0.1 +0.3 +1.9 compare
carbon source L-Fucose (C) +0.3 +1.8 compare
carbon source Protocatechuic Acid (C) +0.3 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +2.3 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.3 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.5 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.8 compare