Fitness data for BPHYT_RS31770 in Burkholderia phytofirmans PsJN

TetR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -1.6 -3.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.4 -3.6 compare
nitrogen source L-Citrulline (N) -1.3 -3.1 compare
phage P. phyto PHYTO2 MOI 0.1 -1.3 -2.5 compare
phage 36hr PHYTO4 MOI 0.1 -1.3 -3.8 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -1.2 -3.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -1.7 compare
phage 36hr PHYTO8 MOI 0.1 -1.1 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.0 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -2.8 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.0 -3.0 compare
carbon source D-Alanine (C) -0.9 -3.0 compare
phage 36hr PHYTO2 MOI 1 -0.9 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.8 compare
phage 24hr PHYTO3 MOI 10 -0.9 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.2 compare
nitrogen source L-Serine (N) -0.9 -2.0 compare
phage P. phyto corn MOI 0.1 -0.9 -2.8 compare
nitrogen source NAG (N) -0.9 -2.4 compare
nophagecontrol 36hr Phyto Lib only +0.9 +2.0 compare