Fitness data for BPHYT_RS31655 in Burkholderia phytofirmans PsJN

glycolate oxidase
SEED: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
KEGG: glycolate oxidase iron-sulfur subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage 36hr PHYTO9 MOI 0.1 -0.6 -2.3 compare
phage 36hr PHYTO10 MOI 10 -0.5 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.4 -1.6 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.4 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -2.3 compare
phage 24hr PHYTO6 MOI 10 -0.4 -1.6 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.4 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.2 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.4 +0.8 compare
nitrogen source L-Glutamic (N) +0.5 +2.0 compare
phage 36hr PHYTO4 MOI 1 +0.5 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.5 +1.9 compare
phage 36hr PHYTO8 MOI 10 +0.5 +1.9 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.6 +3.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +2.0 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.8 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +3.6 compare