Fitness data for BPHYT_RS31220 in Burkholderia phytofirmans PsJN

porin
SEED: Outer membrane protein (porin)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage 24hr PHYTO11 MOI 1 -0.5 -2.4 compare
phage 24hr PHYTO7 MOI 1 -0.5 -2.3 compare
phage 24hr PHYTO11 MOI 0.1 -0.5 -2.1 compare
phage PHYTO3 MOI 0.1 -0.4 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.4 -1.7 compare
supernatant control Vogels_fungal_media 0.1X -0.4 -2.0 compare
carbon source D-Galacturonic Acid (C) -0.4 -1.9 compare
supernatant control Vogels_fungal_media 0.1X -0.4 -2.0 compare
phage 36hr PHYTO11 MOI 0.1 -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.7 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.6 compare
phage 36hr PHYTO11 MOI 1 +0.3 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.2 compare
carbon source D-Glucose 20 mM (C) +0.4 +2.3 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.5 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.5 compare