Fitness data for BPHYT_RS31185 in Burkholderia phytofirmans PsJN

LysR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Phenylacetic 5 mM (C) -1.1 -2.5 compare
phage 36hr PHYTO7 MOI 1 -0.9 -2.3 compare
nitrogen source L-Lysine (N) -0.7 -1.8 compare
phage 36hr PHYTO6 MOI 10 -0.6 -1.6 compare
phage 36hr PHYTO1 MOI 10 -0.6 -1.3 compare
phage P. phyto PHYTO2 MOI 1 -0.6 -1.4 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -0.6 -2.2 compare
phage 36hr PHYTO10 MOI 10 -0.6 -1.6 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.5 -1.7 compare
phage 36hr PHYTO6 MOI 0.1 -0.5 -1.4 compare
phage 36hr PHYTO11 MOI 0.1 -0.5 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.6 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.5 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.6 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +3.0 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.6 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +1.1 compare