Fitness data for BPHYT_RS29190 in Burkholderia phytofirmans PsJN

sugar ABC transporter substrate-binding protein
SEED: ABC-type sugar transport system, periplasmic component
KEGG: multiple sugar transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -1.5 -3.1 compare
phage 36hr PHYTO8 MOI 0.1 -1.5 -2.3 compare
phage 24hr PHYTO8 MOI 1 -1.1 -2.9 compare
phage 36hr PHYTO3 MOI 1 -1.1 -1.5 compare
phage 24hr PHYTO1 MOI 10 -1.1 -2.2 compare
carbon source Suberic (C) -1.1 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -2.2 compare
phage 36hr PHYTO6 MOI 10 -1.0 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.9 -1.7 compare
phage 24hr PHYTO2 MOI 1 -0.9 -1.9 compare
phage 36hr PHYTO4 MOI 0.1 -0.8 -1.7 compare
carbon source Protocatechuic Acid (C) -0.8 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.9 compare
phage 24hr PHYTO3 MOI 0.1 -0.8 -1.3 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.8 -2.0 compare
phage 36hr PHYTO8 MOI 10 -0.8 -1.3 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.8 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +1.4 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +0.9 +3.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +2.9 compare