Fitness data for BPHYT_RS28905 in Burkholderia phytofirmans PsJN

alpha-dehydro-beta-deoxy-D-glucarate aldolase
SEED: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.n4)
KEGG: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
phage 36hr PHYTO11 MOI 0.1 -4.2 -1.4 compare
phage 36hr PHYTO11 MOI 0.1 -4.1 -1.2 compare
phage 36hr PHYTO10 MOI 10 -3.8 -1.2 compare
phage 24hr PHYTO10 MOI 10 -2.5 -1.1 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -2.3 -1.5 compare
phage 24hr PHYTO6 MOI 0.1 -1.9 -1.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -1.8 -1.4 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.8 -1.3 compare
phage 24hr PHYTO7 MOI 10 -1.7 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.6 -1.2 compare
phage 24hr PHYTO1 MOI 1 -1.6 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5 -1.1 compare
phage 36hr PHYTO2 MOI 0.1 -1.4 -0.9 compare
carbon source Protocatechuic Acid (C) -1.4 -1.0 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -1.3 -1.3 compare
nitrogen source L-Serine (N) -1.3 -1.4 compare
carbon source 2-Deoxy-D-Ribose (C) +1.3 +2.3 compare
phage P. phyto corn MOI 1 +1.4 +1.7 compare
carbon source succinate (C) +1.4 +2.3 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +1.5 +2.0 compare