Fitness data for BPHYT_RS28365 in Burkholderia phytofirmans PsJN

Germin subfamily 1 member 15
SEED: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
phage 24hr PHYTO MOI 0.1 -4.3 -1.4 compare
carbon source Suberic (C) -2.6 -1.9 compare
phage 36hr PHYTO4 MOI 1 -2.5 -1.0 compare
motility inner cut, LB soft agar motility assay -2.1 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.0 -1.1 compare
phage 24hr PHYTO2 MOI 1 -2.0 -1.0 compare
nitrogen source L-Serine (N) -1.9 -1.4 compare
phage 36hr PHYTO1 MOI 1 -1.7 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.6 -1.2 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -1.6 -1.1 compare
phage 24hr PHYTO11 MOI 0.1 -1.6 -1.0 compare
phage 36hr PHYTO4 MOI 0.1 -1.5 -1.0 compare
r2a control R2A control -1.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.4 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.4 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.5 +2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +1.6 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.6 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +2.3 +4.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +5.5 +12.7 compare