Fitness data for BPHYT_RS28265 in Burkholderia phytofirmans PsJN

hypothetical protein
SEED: Not a Proline racemase, nor 4-hydroxyproline epimerase [missing catalytic residues]
KEGG: proline racemase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.5 -1.3 compare
nitrogen source Carnitine Hydrochloride (N) -0.5 -2.2 compare
carbon source D-Glucose (C) -0.5 -2.0 compare
phage 36hr PHYTO2 MOI 1 -0.5 -1.5 compare
nitrogen source L-Proline (N) -0.4 -2.4 compare
nitrogen source Putrescine (N) -0.4 -2.4 compare
phage 24hr PHYTO1 MOI 10 +0.4 +2.1 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.4 +1.8 compare
phage 24hr PHYTO10 MOI 10 +0.4 +2.3 compare
carbon source Phenylacetic 5 mM (C) +0.5 +1.0 compare
carbon source 2-Deoxy-D-Ribose (C) +0.5 +2.0 compare
stress Cephalothin 2 mg/ml +0.5 +2.0 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.5 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.6 compare
carbon source Tween 20 (C) +0.5 +1.2 compare
carbon source Protocatechuic Acid (C) +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.7 +1.5 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.8 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +2.6 compare