Fitness data for BPHYT_RS26875 in Burkholderia phytofirmans PsJN

procollagen-proline dioxygenase
SEED: Similar to eukaryotic Peptidyl prolyl 4-hydroxylase, alpha subunit (EC 1.14.11.2)
KEGG: prolyl 4-hydroxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.4 compare
phage 36hr PHYTO9 MOI 1 -0.8 -2.2 compare
phage 24hr PHYTO7 MOI 10 -0.7 -2.2 compare
phage 24hr PHYTO6 MOI 10 -0.6 -1.5 compare
phage 24hr PHYTO2 MOI 0.1 -0.6 -1.6 compare
phage 36hr PHYTO1 MOI 10 -0.6 -1.3 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.8 compare
phage 24hr PHYTO MOI 0.1 -0.5 -1.4 compare
carbon source L-Fucose (C) +0.5 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.7 compare
temperature LB, 23C +0.6 +1.7 compare
phage 24hr PHYTO11 MOI 0.1 +0.6 +2.5 compare
phage 24hr PHYTO9 MOI 10 +0.6 +1.4 compare
pH LB, pH4 +0.6 +2.2 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.6 compare
carbon source Protocatechuic Acid (C) +0.6 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.4 compare
motility inner cut, LB soft agar motility assay +0.6 +1.4 compare
motility outer cut, LB soft agar motility assay +0.6 +2.2 compare
phage 24hr PHYTO4 MOI 10 +0.9 +1.6 compare