Fitness data for BPHYT_RS26315 in Burkholderia phytofirmans PsJN

sigma factor sigB regulation protein rsbQ
SEED: Hydrolase of unknown specificity RsbQ, part of a novel [RsbQ - PAS domain] bacterial sensing module

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -1.8 -2.4 compare
nitrogen source L-Lysine (N) -1.0 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -1.6 compare
carbon source adipate (C) -0.8 -1.5 compare
vitamin With vitamins t1 -0.8 -1.6 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.7 -1.7 compare
carbon source Sebacic (C) -0.7 -1.3 compare
phage P. phyto corn MOI 1 -0.7 -1.4 compare
carbon source D-Glucose (C) +0.7 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.6 compare
phage 36hr PHYTO3 MOI 1 +0.7 +1.4 compare
phage 36hr PHYTO7 MOI 0.1 +0.7 +1.6 compare
phage 24hr PHYTO2 MOI 0.1 +0.7 +1.7 compare
carbon source Malonic (C) +0.7 +1.1 compare
phage 36hr PHYTO6 MOI 0.1 +0.7 +2.4 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.8 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.9 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.2 +2.7 compare