Fitness data for BPHYT_RS26220 in Burkholderia phytofirmans PsJN

6-phosphogluconate dehydrogenase
SEED: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
KEGG: 6-phosphogluconate dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant control Vogels_fungal_media; pH 5.5 -0.5 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.9 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.4 -1.2 compare
phage 36hr PHYTO2 MOI 1 -0.4 -1.7 compare
phage P. phyto PHYTO2 MOI 1 -0.4 -1.2 compare
carbon source D-Galacturonic Acid (C) -0.4 -1.8 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.4 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.2 compare
nitrogen source L-Phenylalanine (N) +0.4 +1.4 compare
phage 36hr PHYTO3 MOI 1 +0.4 +1.7 compare
phage 24hr PHYTO11 MOI 0.1 +0.4 +2.1 compare
phage 24hr PHYTO2 MOI 0.1 +0.4 +2.2 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.5 +1.5 compare
phage 24hr PHYTO10 MOI 10 +0.5 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.1 compare
phage 24hr PHYTO MOI 0.1 +0.5 +2.1 compare
phage 36hr PHYTO9 MOI 1 +0.5 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.7 compare