Fitness data for BPHYT_RS25635 in Burkholderia phytofirmans PsJN

2-dehydropantoate 2-reductase
SEED: 2-dehydropantoate 2-reductase (EC 1.1.1.169)
KEGG: 2-dehydropantoate 2-reductase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.8 -3.2 compare
phage 36hr PHYTO6 MOI 1 -0.6 -2.6 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.6 -1.6 compare
nutrient Min media with glucose -0.5 -3.0 compare
phage 24hr PHYTO3 MOI 0.1 -0.5 -2.5 compare
vitamin With vitamins t2 -0.4 -2.0 compare
no phage control No phage control +0.4 +1.6 compare
phage 24hr PHYTO8 MOI 1 +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.3 compare
phage P. phyto corn MOI 1 +0.5 +2.0 compare
carbon source L-Lactate (C) +0.5 +2.4 compare
carbon source Phenylacetic 5 mM (C) +0.5 +1.9 compare
stress Chloride 200 mM +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +2.4 compare
carbon source Tween 20 (C) +0.6 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.8 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +2.2 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.7 +2.4 compare
phage 24hr PHYTO7 MOI 1 +0.7 +2.7 compare