Fitness data for BPHYT_RS25170 in Burkholderia phytofirmans PsJN

aldehyde dismutase
SEED: Threonine dehydrogenase and related Zn-dependent dehydrogenases
KEGG: glutathione-independent formaldehyde dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -2.1 compare
motility inner cut, LB soft agar motility assay -0.9 -2.4 compare
phage 36hr PHYTO1 MOI 10 -0.9 -2.1 compare
phage 36hr PHYTO10 MOI 10 -0.8 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7 -2.9 compare
phage 24hr PHYTO8 MOI 1 -0.7 -1.3 compare
phage 36hr PHYTO3 MOI 1 -0.6 -1.6 compare
phage 36hr PHYTO2 MOI 1 -0.6 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.6 +1.8 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.6 +2.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.7 +1.4 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.7 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.5 compare
nophagecontrol 36hr Phyto Lib only +0.8 +3.9 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.8 +2.1 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +1.0 +2.1 compare