Fitness data for BPHYT_RS23025 in Burkholderia phytofirmans PsJN

GMC family oxidoreductase
SEED: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein
KEGG: gluconate 2-dehydrogenase alpha chain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.8 compare
carbon source D,L-Lactate (C) -0.6 -3.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.7 compare
phage 36hr PHYTO11 MOI 1 -0.5 -1.9 compare
phage 36hr PHYTO6 MOI 1 -0.5 -1.7 compare
phage 36hr PHYTO1 MOI 10 -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.3 compare
nophagecontrol 36hr Phyto Lib only -0.4 -1.4 compare
phage PHYTO3 MOI 0.1 -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.4 -1.4 compare
carbon source Azelaic (C) -0.4 -1.8 compare
phage 36hr PHYTO2 MOI 1 +0.4 +1.1 compare
phage P. phyto corn MOI 1 +0.4 +1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.5 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.5 +1.9 compare