Fitness data for BPHYT_RS22965 in Burkholderia phytofirmans PsJN

ligand-gated channel protein
SEED: Outer membrane receptor proteins, mostly Fe transport
KEGG: iron complex outermembrane recepter protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 321 experiments or choose conditions

group condition fitness t score  
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.7 -2.7 compare
pH LB, pH5 -0.5 -3.5 compare
phage 24hr PHYTO2 MOI 1 -0.4 -2.3 compare
phage PHYTO3 MOI 0.1 +0.4 +2.6 compare
phage 36hr PHYTO4 MOI 1 +0.4 +2.5 compare
phage 36hr PHYTO4 MOI 0.1 +0.5 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +2.2 compare
no phage control No phage control +0.5 +3.8 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 +0.5 +2.7 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 +0.5 +3.0 compare
phage 36hr PHYTO6 MOI 1 +0.5 +2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.5 +2.6 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.5 +2.5 compare
phage 36hr PHYTO1 MOI 1 +0.5 +3.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.3 compare
nitrogen source L-Lysine (N) +0.6 +3.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +2.0 compare
stress Benzethonium chloride 0.0016 mM +1.0 +7.9 compare
stress Cephalothin 2 mg/ml +1.1 +8.3 compare