Fitness data for BPHYT_RS22905 in Burkholderia phytofirmans PsJN

secretin
SEED: Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly
KEGG: pilus assembly protein CpaC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.6 -1.9 compare
nutrient casaminos -0.5 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.3 compare
nophagecontrol 36hr Phyto Lib Only +0.4 +1.2 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.4 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.2 compare
phage 36hr PHYTO3 MOI 1 +0.4 +2.2 compare
phage 24hr PHYTO MOI 0.1 +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare
phage 36hr PHYTO4 MOI 1 +0.5 +1.5 compare
phage 24hr PHYTO1 MOI 10 +0.5 +1.8 compare
phage 36hr PHYTO2 MOI 1 +0.5 +1.9 compare
phage 24hr PHYTO4 MOI 10 +0.5 +1.6 compare
nophagecontrol 24hr Phyto Lib Only +0.6 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.9 compare
phage 36hr PHYTO3 MOI 1 +0.6 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +2.5 compare
carbon source Suberic (C) +0.7 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +3.3 compare