Fitness data for BPHYT_RS22865 in Burkholderia phytofirmans PsJN

ATPase
SEED: Integral membrane sensor signal transduction histidine kinase (EC 2.7.13.3), glucose catabolism cluster

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -5.5 -2.0 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -4.5 -2.1 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -3.8 -2.7 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -2.6 -2.0 compare
phage 24hr PHYTO9 MOI 10 -2.3 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.1 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -1.9 -1.8 compare
nophagecontrol 36hr Phyto Lib Only -1.9 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.7 -2.5 compare
phage 36hr PHYTO7 MOI 1 -1.5 -1.5 compare
carbon source 2-Deoxy-D-Ribose (C) -1.4 -2.2 compare
phage 36hr PHYTO8 MOI 0.1 -1.3 -1.8 compare
phage 24hr PHYTO3 MOI 10 -1.3 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days -1.3 -2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -1.0 compare
phage 24hr PHYTO1 MOI 10 -1.2 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.1 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.1 +1.2 compare
carbon source D-Glucose (C) +1.4 +2.1 compare