Fitness data for BPHYT_RS22715 in Burkholderia phytofirmans PsJN

L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) (from data)
Original annotation: cytochrome C biogenesis protein CcdA
SEED: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43)
KEGG: dihydrodipicolinate synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source L-Arabinose (C) -2.5 -4.4 compare
phage P. phyto PHYTO2 MOI 1 -2.3 -2.5 compare
phage 36hr PHYTO4 MOI 1 -1.1 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -2.0 compare
phage 24hr PHYTO7 MOI 1 -1.1 -1.3 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -0.9 -2.1 compare
lb LB -0.9 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.6 compare
phage 36hr PHYTO1 MOI 1 -0.8 -1.8 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.8 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.0 compare
carbon source D-Glucose (C) +0.7 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +1.3 compare
nophagecontrol 36hr Phyto Lib Only +0.8 +2.1 compare
phage 36hr PHYTO7 MOI 0.1 +0.9 +1.9 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +1.1 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.4 +3.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.7 +1.0 compare