Fitness data for BPHYT_RS22650 in Burkholderia phytofirmans PsJN

pyridine nucleotide-disulfide oxidoreductase
SEED: Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.9 -2.7 compare
supernatant control Vogels_fungal_media 0.1X -0.7 -3.0 compare
nitrogen source L-Lysine (N) -0.7 -1.8 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.5 -1.4 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.5 -1.5 compare
carbon source Sebacic (C) -0.4 -1.5 compare
vitamin No vitamins t1 -0.4 -2.1 compare
vitamin With vitamins t2 -0.4 -2.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.9 compare
carbon source D-Fructose (C) +0.4 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.3 compare
carbon source D-Glucose (C) +0.5 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.0 compare
carbon source D-Glucose (C) +0.5 +2.8 compare
motility outer cut, LB soft agar motility assay +0.5 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.0 compare