Fitness data for BPHYT_RS22600 in Burkholderia phytofirmans PsJN

transport protein RbsD/FucU
SEED: L-fucose mutarotase
KEGG: L-fucose mutarotase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.9 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -1.8 compare
phage 24hr PHYTO6 MOI 10 -0.8 -1.2 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.7 -1.4 compare
nitrogen source D-Alanine (N) -0.6 -1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.6 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.2 compare
phage 24hr PHYTO3 MOI 10 +0.6 +2.0 compare
phage 36hr PHYTO4 MOI 1 +0.6 +1.6 compare
phage 36hr PHYTO7 MOI 1 +0.7 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.9 compare
stress Paraquat dichloride 0.064 mg/ml +0.7 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +3.0 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +1.1 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.2 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +3.5 compare
carbon source 2-Deoxy-D-Ribose (C) +2.1 +6.7 compare
carbon source 2-Deoxy-D-Ribose (C) +2.2 +10.6 compare