Fitness data for BPHYT_RS22045 in Burkholderia phytofirmans PsJN

peptide ABC transporter permease
SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
KEGG: peptide/nickel transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
vitamin With vitamins t1 -1.3 -2.4 compare
nitrogen source L-Lysine (N) -1.0 -1.5 compare
carbon source Phenylacetic 5 mM (C) -0.9 -1.3 compare
nitrogen source L-Glutamic (N) +0.8 +1.1 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.8 +1.5 compare
phage 24hr PHYTO10 MOI 1 +0.8 +2.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.8 +2.4 compare
phage 24hr PHYTO11 MOI 1 +0.8 +2.1 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.8 +1.5 compare
carbon source L-Fucose (C) +0.9 +2.9 compare
stress Nickel (II) chloride 1 mM +0.9 +4.0 compare
phage P. phyto PHYTO2 MOI 1 +0.9 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +1.9 compare
phage 24hr PHYTO2 MOI 0.1 +1.0 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +3.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.1 +1.4 compare
carbon source Malonic (C) +1.1 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.2 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +1.3 compare
supernatant control Vogels_fungal_media; pH 5.5 +1.2 +4.2 compare