Fitness data for BPHYT_RS21925 in Burkholderia phytofirmans PsJN

formimidoylglutamase
SEED: Formiminoglutamase (EC 3.5.3.8)
KEGG: formiminoglutamase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage 24hr PHYTO3 MOI 1 -1.3 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -1.1 -0.9 compare
phage 36hr PHYTO8 MOI 10 -0.9 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9 -1.6 compare
phage 24hr PHYTO7 MOI 10 -0.9 -1.4 compare
lb LB -0.9 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.3 compare
phage 36hr PHYTO8 MOI 10 +0.8 +1.5 compare
phage 36hr PHYTO4 MOI 0.1 +0.8 +2.5 compare
carbon source 2-Deoxy-D-Ribose (C) +0.8 +2.2 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.8 +1.6 compare
motility inner cut, LB soft agar motility assay +0.9 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +2.3 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.9 +0.9 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.9 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +1.1 +1.5 compare
phage 36hr PHYTO4 MOI 1 +1.2 +3.2 compare