Fitness data for BPHYT_RS21745 in Burkholderia phytofirmans PsJN

choline dehydrogenase
SEED: Choline dehydrogenase (EC 1.1.99.1)
KEGG: choline dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source 2-Deoxy-D-Ribose (C) -0.7 -4.0 compare
carbon source 2-Deoxy-D-Ribose (C) -0.6 -3.3 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.6 -2.0 compare
nitrogen source Ammonium chloride (N) -0.5 -2.2 compare
carbon source 2-Deoxy-D-Ribose (C) -0.5 -3.0 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.5 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -2.0 compare
pH LB, pH4 -0.4 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.0 compare
carbon source Suberic (C) +0.4 +1.9 compare
nophagecontrol 24hr Phyto Lib only +0.4 +1.6 compare
phage 24hr PHYTO4 MOI 10 +0.5 +1.9 compare
carbon source adipate (C) +0.5 +2.6 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.9 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.6 +2.8 compare
carbon source Protocatechuic Acid (C) +0.6 +2.9 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.6 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.8 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +3.1 +13.6 compare