Fitness data for BPHYT_RS21585 in Burkholderia phytofirmans PsJN

short-chain dehydrogenase
SEED: Short-chain dehydrodenase (gene dltE)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
nitrogen source L-Serine (N) -1.3 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -1.2 -0.8 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.2 -1.4 compare
phage P. phyto PHYTO2 MOI 0.1 -1.1 -2.1 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -1.0 -2.2 compare
motility inner cut, LB soft agar motility assay -1.0 -2.2 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.0 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +1.7 compare
phage 36hr PHYTO6 MOI 0.1 +1.0 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.1 compare
carbon source D-Ribose (C) +1.1 +3.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +0.9 compare
phage 36hr PHYTO7 MOI 1 +1.1 +2.2 compare
phage 24hr PHYTO7 MOI 1 +1.2 +2.3 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +1.2 +2.1 compare
phage 36hr PHYTO10 MOI 10 +1.2 +3.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +2.6 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +1.8 +1.4 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +1.8 +1.6 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +2.0 +1.7 compare