Fitness data for BPHYT_RS21035 in Burkholderia phytofirmans PsJN

ABC transporter permease
SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
KEGG: simple sugar transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage 36hr PHYTO2 MOI 1 -2.1 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.9 -2.1 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.7 -2.7 compare
phage 24hr PHYTO4 MOI 10 -1.7 -2.1 compare
vitamin No vitamins t1 -1.1 -2.5 compare
nophagecontrol 36hr Phyto Lib only -1.0 -1.7 compare
phage 36hr PHYTO1 MOI 10 -1.0 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.1 compare
phage 36hr PHYTO3 MOI 0.1 -0.9 -2.0 compare
phage 36hr PHYTO4 MOI 0.1 -0.9 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.3 compare
phage 36hr PHYTO11 MOI 0.1 -0.7 -1.0 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.8 +0.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +1.9 compare
motility outer cut, LB soft agar motility assay +0.8 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +2.1 compare
motility outer cut, LB soft agar motility assay +0.9 +2.1 compare
carbon source D-Glucose 20 mM (C) +1.0 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.3 +1.7 compare
phage 24hr PHYTO6 MOI 10 +1.3 +3.5 compare