Fitness data for BPHYT_RS20105 in Burkholderia phytofirmans PsJN

nitrate ABC transporter substrate-binding protein
SEED: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -2.0 -2.5 compare
phage 36hr PHYTO7 MOI 0.1 -1.8 -2.6 compare
phage 36hr PHYTO8 MOI 10 -1.2 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.0 compare
phage 36hr PHYTO10 MOI 1 -1.0 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -2.2 compare
carbon source D-Fructose (C) -0.9 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.9 -1.9 compare
phage 24hr PHYTO MOI 0.1 -0.8 -1.3 compare
motility inner cut, LB soft agar motility assay -0.8 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.9 +1.5 compare
phage 36hr PHYTO11 MOI 1 +0.9 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.3 compare
nophagecontrol 36hr Phyto Lib only +0.9 +1.3 compare
phage 24hr PHYTO3 MOI 0.1 +0.9 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.6 compare
phage 36hr PHYTO2 MOI 1 +1.0 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +2.8 +1.4 compare