Fitness data for BPHYT_RS19150 in Burkholderia phytofirmans PsJN

phytanoyl-CoA dioxygenase
SEED: Phytanoyl-CoA dioxygenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -3.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.7 compare
phage 36hr PHYTO11 MOI 0.1 -0.6 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.7 compare
nitrogen source L-Alanine (N) -0.5 -2.1 compare
phage 24hr PHYTO4 MOI 10 -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -2.1 compare
carbon source Tween 20 (C) -0.4 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.1 compare
nitrogen source L-Serine (N) -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.9 compare
motility outer cut, LB soft agar motility assay +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.6 compare
carbon source succinate (C) +0.5 +2.3 compare
carbon source D-Glucose (C) +0.5 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.2 compare
phage 36hr PHYTO10 MOI 10 +0.5 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.5 +2.1 compare