| group | condition | fitness | t score | |
|---|
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI | -0.2 | -0.5 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI | -0.8 | -2.4 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI | -0.3 | -1.5 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI | -0.0 | -0.2 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI | +0.0 | +0.1 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI | +0.3 | +1.7 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant | +0.3 | +1.6 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant | -0.4 | -1.3 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant | +0.3 | +1.5 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant | +0.4 | +1.3 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant | +0.1 | +0.6 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant | -0.1 | -0.4 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant | -0.0 | -0.1 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant | -0.3 | -1.3 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant | -0.1 | -0.3 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant | +0.6 | +2.6 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant | +0.1 | +0.4 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant | +0.1 | +0.2 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant | -0.1 | -0.4 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant | -0.1 | -0.3 | compare |
| Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant | -0.2 | -0.6 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | +0.2 | +0.8 | compare |
| Parafilmed volatile agar plate with no fungus | -0.2 | -0.7 | compare |
| Parafilmed volatile agar plate with no fungus | -1.7 | -4.0 | compare |
| Parafilmed volatile agar plate with no fungus | -0.5 | -2.7 | compare |
| Parafilmed volatile agar plate with no fungus | -0.8 | -3.2 | compare |
| Parafilmed volatile agar plate with no fungus | -0.0 | -0.2 | compare |
| Parafilmed volatile agar plate with no fungus | -0.1 | -0.3 | compare |
| Parafilmed volatile agar plate with no fungus | -0.2 | -0.8 | compare |
| Parafilmed volatile agar plate with no fungus | -0.1 | -0.3 | compare |
| Parafilmed volatile agar plate with no fungus | +0.0 | +0.2 | compare |
| carbon source | 2-Deoxy-D-ribonic lithium salt (C) | +0.1 | +0.4 | compare |
| 2-Deoxy-D-Ribose (C) | +0.1 | +0.5 | compare |
| 2-Deoxy-D-Ribose (C) | +0.1 | +0.8 | compare |
| 2-Deoxy-D-Ribose (C) | +0.4 | +2.9 | compare |
| 2-Deoxy-D-Ribose (C) | +0.2 | +1.0 | compare |
| 2-Deoxyadenosine 5-monophosphate 5 mM (C) | -0.2 | -1.0 | compare |
| Azelaic (C) | +0.1 | +0.8 | compare |
| D-Alanine (C) | -0.4 | -2.2 | compare |
| D-Fructose (C) | -0.1 | -0.4 | compare |
| D-Fructose (C) | +0.0 | +0.1 | compare |
| D-Fructose (C) | +0.2 | +1.4 | compare |
| D-Fructose (C) | +0.6 | +3.3 | compare |
| D-Fructose (C) | +0.5 | +3.1 | compare |
| D-Galactose (C) | +0.2 | +0.9 | compare |
| D-Galacturonic Acid (C) | -0.5 | -1.5 | compare |
| D-Gluconic Acid (C) | +0.2 | +0.9 | compare |
| D-Glucosamine Hydrochloride (C) | -0.0 | -0.1 | compare |
| D-Glucose (C) | -0.1 | -0.7 | compare |
| D-Glucose (C) | -0.2 | -1.1 | compare |
| D-Glucose (C) | -0.0 | -0.2 | compare |
| D-Glucose (C) | +0.0 | +0.3 | compare |
| D-Glucose (C) | +0.4 | +2.2 | compare |
| D-Glucose (C) | +0.6 | +3.4 | compare |
| D-Glucose (C) | +0.7 | +3.8 | compare |
| D-Glucose (C) | +0.6 | +4.0 | compare |
| D-Glucose 20 mM (C) | +0.2 | +1.3 | compare |
| D-Glucose 20 mM (C) | +0.3 | +1.8 | compare |
| D-Mannose (C) | -0.1 | -0.4 | compare |
| D-Ribose (C) | +0.5 | +3.0 | compare |
| D-Sorbitol (C) | -0.3 | -1.8 | compare |
| D-Xylose (C) | +0.4 | +1.7 | compare |
| Deoxyribonucleic from herring sperm 10 mg/mL (C) | -0.1 | -0.3 | compare |
| Deoxyribonucleic from herring sperm 10 mg/mL (C) | -0.2 | -0.7 | compare |
| Disodium Glutarate (C) | +0.1 | +0.3 | compare |
| Disodium Glutarate (C) | +0.0 | +0.4 | compare |
| Dodecandioic (C) | -0.1 | -0.5 | compare |
| Gly-Glu (C) | +0.7 | +4.1 | compare |
| L-Alanine (C) | -0.2 | -0.8 | compare |
| L-Arabinose (C) | +0.2 | +1.5 | compare |
| L-Arginine (C) | -0.1 | -0.6 | compare |
| L-Asparagine (C) | +0.1 | +0.5 | compare |
| L-Fucose (C) | +0.1 | +0.4 | compare |
| L-Glutamine (C) | -0.1 | -0.4 | compare |
| L-Histidine (C) | -0.0 | -0.2 | compare |
| L-Malic (C) | -0.2 | -1.1 | compare |
| L-Phenylalanine (C) | +0.2 | +0.9 | compare |
| L-Proline (C) | -0.4 | -1.9 | compare |
| L-Rhamnose (C) | +0.0 | +0.1 | compare |
| L-Tryptophan (C) | -0.1 | -0.6 | compare |
| m-Inositol (C) | +0.1 | +0.6 | compare |
| Malonic (C) | +0.2 | +0.8 | compare |
| Malonic (C) | +0.1 | +0.5 | compare |
| NAG (C) | +0.3 | +1.9 | compare |
| Phenylacetic 5 mM (C) | -0.2 | -0.9 | compare |
| Phenylacetic 5 mM (C) | -0.3 | -0.9 | compare |
| Protocatechuic Acid (C) | -0.3 | -1.4 | compare |
| Protocatechuic Acid (C) | -0.6 | -2.5 | compare |
| Putrescine (C) | -0.3 | -1.9 | compare |
| Sebacic (C) | -0.1 | -0.7 | compare |
| Sebacic (C) | -0.2 | -1.2 | compare |
| adipate (C) | -0.2 | -0.5 | compare |
| D,L-Lactate (C) | +0.0 | +0.1 | compare |
| D,L-Lactate (C) | +0.1 | +0.6 | compare |
| D,L-Lactate (C) | +0.0 | +0.2 | compare |
| D,L-Lactate (C) | +0.5 | +3.5 | compare |
| D,L-Lactate (C) | +0.2 | +1.3 | compare |
| D-Lactate (C) | -0.2 | -1.3 | compare |
| L-Lactate (C) | -0.1 | -0.3 | compare |
| propionate (C) | -0.2 | -0.8 | compare |
| pyruvate (C) | -0.2 | -0.9 | compare |
| succinate (C) | -0.1 | -0.6 | compare |
| succinate (C) | -0.0 | -0.2 | compare |
| Suberic (C) | +0.3 | +1.2 | compare |
| Suberic (C) | +0.1 | +0.3 | compare |
| Trisodium citrate (C) | +0.3 | +1.6 | compare |
| Tween 20 (C) | -0.7 | -2.4 | compare |
| Xylitol (C) | +0.4 | +1.7 | compare |
| in planta | Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days | -0.2 | -0.9 | compare |
| Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days | -0.3 | -1.4 | compare |
| Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days | -0.0 | -0.0 | compare |
| Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days | -0.3 | -1.4 | compare |
| Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days | -0.4 | -1.7 | compare |
| Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days | +0.0 | +0.1 | compare |
| Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days | -0.4 | -1.2 | compare |
| Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days | +0.4 | +1.8 | compare |
| Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days | +0.1 | +0.3 | compare |
| Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 | +0.0 | +0.0 | compare |
| Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days | -1.2 | -2.8 | compare |
| Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days | -0.1 | -0.6 | compare |
| Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days | -0.2 | -0.8 | compare |
| Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days | +0.4 | +1.2 | compare |
| Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days | +0.3 | +1.5 | compare |
| Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days | +0.2 | +0.9 | compare |
| Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days | +0.5 | +1.8 | compare |
| Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days | -0.1 | -0.3 | compare |
| Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days | +0.5 | +2.7 | compare |
| Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | +0.6 | +3.0 | compare |
| Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | +0.0 | +0.0 | compare |
| Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | -0.1 | -0.7 | compare |
| Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | +0.2 | +1.2 | compare |
| Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | +0.6 | +2.5 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days | -0.3 | -1.4 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days | -0.3 | -1.0 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days | -1.1 | -4.6 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days | -1.1 | -3.0 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days | -0.5 | -1.9 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days | -0.0 | -0.1 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days | +0.4 | +2.3 | compare |
| Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days | -0.2 | -1.0 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days | -1.0 | -3.1 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days | -1.0 | -4.5 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days | -1.6 | -8.6 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days | -0.4 | -1.4 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days | +0.5 | +2.2 | compare |
| Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days | +0.2 | +1.0 | compare |
| Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 | -0.7 | -2.6 | compare |
| lb | LB | +0.0 | +0.1 | compare |
| LB | -0.0 | -0.0 | compare |
| LB | -0.1 | -0.8 | compare |
| lb_dap plate control | LB_DAP agar plate, outgrowth in LB | -0.1 | -0.4 | compare |
| LB_DAP agar plate, outgrowth in LB | -0.1 | -0.3 | compare |
| lb_dap plate control and outgrow on gent | LB_DAP agar plate, outgrowth in LB_gent | +0.2 | +1.0 | compare |
| LB_DAP agar plate, outgrowth in LB_gent | +0.3 | +1.1 | compare |
| lb_nosalt | LB_noSalt | +0.2 | +1.1 | compare |
| motility | inner cut, LB soft agar motility assay | -3.1 | -6.7 | compare |
| inner cut, LB soft agar motility assay | -3.0 | -4.9 | compare |
| inner cut, LB soft agar motility assay | -1.9 | -5.1 | compare |
| outer cut, LB soft agar motility assay | -5.2 | -6.9 | compare |
| outer cut, LB soft agar motility assay | -5.2 | -8.1 | compare |
| outer cut, LB soft agar motility assay | -1.5 | -4.3 | compare |
| nitrogen source | Ammonium chloride (N) | +0.1 | +0.6 | compare |
| Carnitine Hydrochloride (N) | -0.1 | -0.6 | compare |
| D-Alanine (N) | +0.2 | +1.0 | compare |
| L-Alanine (N) | +0.1 | +0.6 | compare |
| L-Asparagine (N) | +0.2 | +0.9 | compare |
| L-Citrulline (N) | +0.2 | +1.1 | compare |
| L-Glutamic (N) | +0.7 | +3.0 | compare |
| L-Glutamine (N) | +0.4 | +2.3 | compare |
| L-Isoleucine (N) | +0.6 | +3.4 | compare |
| L-Lysine (N) | -0.4 | -1.2 | compare |
| L-Phenylalanine (N) | +0.1 | +0.3 | compare |
| L-Proline (N) | +0.2 | +0.8 | compare |
| L-Serine (N) | +0.1 | +0.4 | compare |
| NAG (N) | +0.3 | +1.4 | compare |
| Putrescine (N) | -0.2 | -0.8 | compare |
| Uridine (N) | +0.1 | +0.2 | compare |
| no phage control | No phage control | -0.3 | -1.3 | compare |
| nophagecontrol | 24hr Phyto Lib Only | +0.1 | +0.2 | compare |
| 24hr Phyto Lib Only | -0.0 | -0.2 | compare |
| 24hr Phyto Lib only | -0.1 | -0.4 | compare |
| 36hr Phyto Lib Only | +0.0 | +0.1 | compare |
| 36hr Phyto Lib Only | -0.0 | -0.1 | compare |
| 36hr Phyto Lib only | +0.3 | +1.0 | compare |
| 36hr Phyto Lib only | -0.2 | -1.0 | compare |
| nutrient | Min media with glucose | +0.3 | +1.5 | compare |
| Min media with glucose | +0.2 | +1.1 | compare |
| casaminos | +0.2 | +0.8 | compare |
| casaminos | +0.3 | +1.4 | compare |
| L-Histidine | -0.1 | -0.7 | compare |
| L-Histidine | +0.2 | +1.2 | compare |
| L-Serine | +0.1 | +0.6 | compare |
| L-Serine | +0.3 | +1.2 | compare |
| pH | LB, pH4 | -0.1 | -0.3 | compare |
| LB, pH4 | -0.0 | -0.3 | compare |
| LB, pH5 | +0.2 | +1.0 | compare |
| LB, pH5 | +0.1 | +0.4 | compare |
| LB, pH6 | +0.1 | +0.7 | compare |
| LB, pH7 | +0.0 | +0.1 | compare |
| LB, pH7 | +0.3 | +1.8 | compare |
| phage | 24hr PHYTO MOI 0.1 | +0.2 | +0.7 | compare |
| 24hr PHYTO MOI 0.1 | +0.3 | +1.5 | compare |
| 24hr PHYTO1 MOI 1 | -0.0 | -0.1 | compare |
| 24hr PHYTO1 MOI 10 | +0.3 | +1.5 | compare |
| 24hr PHYTO1 MOI 10 | +0.1 | +0.5 | compare |
| 24hr PHYTO10 MOI 1 | -0.2 | -0.9 | compare |
| 24hr PHYTO10 MOI 10 | -0.1 | -0.3 | compare |
| 24hr PHYTO10 MOI 10 | -0.2 | -0.9 | compare |
| 24hr PHYTO11 MOI 0.1 | +0.1 | +0.5 | compare |
| 24hr PHYTO11 MOI 1 | -0.3 | -0.8 | compare |
| 24hr PHYTO2 MOI 0.1 | -0.1 | -0.6 | compare |
| 24hr PHYTO2 MOI 0.1 | -0.0 | -0.1 | compare |
| 24hr PHYTO2 MOI 1 | -0.0 | -0.1 | compare |
| 24hr PHYTO3 MOI 0.1 | +0.1 | +0.3 | compare |
| 24hr PHYTO3 MOI 1 | +0.1 | +0.4 | compare |
| 24hr PHYTO3 MOI 10 | +0.3 | +0.9 | compare |
| 24hr PHYTO3 MOI 10 | +0.5 | +1.7 | compare |
| 24hr PHYTO4 MOI 0.1 | -0.2 | -0.7 | compare |
| 24hr PHYTO4 MOI 10 | +0.0 | +0.1 | compare |
| 24hr PHYTO6 MOI 0.1 | -0.1 | -0.5 | compare |
| 24hr PHYTO6 MOI 0.1 | -0.2 | -0.8 | compare |
| 24hr PHYTO6 MOI 1 | +0.1 | +0.4 | compare |
| 24hr PHYTO6 MOI 10 | -0.0 | -0.2 | compare |
| 24hr PHYTO7 MOI 1 | -0.3 | -0.9 | compare |
| 24hr PHYTO7 MOI 10 | -0.0 | -0.1 | compare |
| 24hr PHYTO8 MOI 1 | +0.1 | +0.2 | compare |
| 24hr PHYTO9 MOI 0.1 | -0.1 | -0.5 | compare |
| 24hr PHYTO9 MOI 10 | -0.2 | -0.7 | compare |
| 36hr PHYTO MOI 0.1 | +0.1 | +0.6 | compare |
| 36hr PHYTO1 MOI 1 | -0.3 | -1.0 | compare |
| 36hr PHYTO1 MOI 1 | -0.1 | -0.4 | compare |
| 36hr PHYTO1 MOI 10 | +0.1 | +0.6 | compare |
| 36hr PHYTO1 MOI 10 | +0.1 | +0.6 | compare |
| 36hr PHYTO10 MOI 1 | -0.1 | -0.3 | compare |
| 36hr PHYTO10 MOI 10 | +0.2 | +1.2 | compare |
| 36hr PHYTO10 MOI 10 | +0.3 | +1.0 | compare |
| 36hr PHYTO11 MOI 0.1 | -0.3 | -1.3 | compare |
| 36hr PHYTO11 MOI 0.1 | +0.1 | +0.3 | compare |
| 36hr PHYTO11 MOI 1 | -0.0 | -0.2 | compare |
| 36hr PHYTO11 MOI 1 | -0.0 | -0.1 | compare |
| 36hr PHYTO2 MOI 0.1 | +0.3 | +0.9 | compare |
| 36hr PHYTO2 MOI 1 | +0.1 | +0.3 | compare |
| 36hr PHYTO2 MOI 1 | +0.0 | +0.1 | compare |
| 36hr PHYTO3 MOI 0.1 | +0.2 | +1.0 | compare |
| 36hr PHYTO3 MOI 1 | -0.0 | -0.0 | compare |
| 36hr PHYTO3 MOI 1 | -0.0 | -0.1 | compare |
| 36hr PHYTO4 MOI 0.1 | -0.2 | -1.0 | compare |
| 36hr PHYTO4 MOI 1 | +0.1 | +0.6 | compare |
| 36hr PHYTO4 MOI 1 | +0.1 | +0.4 | compare |
| 36hr PHYTO6 MOI 0.1 | +0.1 | +0.3 | compare |
| 36hr PHYTO6 MOI 0.1 | +0.1 | +0.3 | compare |
| 36hr PHYTO6 MOI 1 | -0.2 | -0.6 | compare |
| 36hr PHYTO6 MOI 10 | +0.2 | +1.0 | compare |
| 36hr PHYTO7 MOI 0.1 | -0.1 | -0.3 | compare |
| 36hr PHYTO7 MOI 1 | +0.1 | +0.3 | compare |
| 36hr PHYTO8 MOI 0.1 | +0.0 | +0.2 | compare |
| 36hr PHYTO8 MOI 10 | +0.2 | +0.6 | compare |
| 36hr PHYTO8 MOI 10 | +0.2 | +0.5 | compare |
| 36hr PHYTO9 MOI 0.1 | +0.3 | +0.9 | compare |
| 36hr PHYTO9 MOI 1 | -0.1 | -0.4 | compare |
| P. phyto corn MOI 0.1 | +0.3 | +1.4 | compare |
| P. phyto corn MOI 1 | +0.1 | +0.6 | compare |
| P. phyto PHYTO2 MOI 0.1 | -0.2 | -0.5 | compare |
| P. phyto PHYTO2 MOI 1 | +0.3 | +1.0 | compare |
| P. phyto PHYTO2 MOI 1 | +0.0 | +0.2 | compare |
| PHYTO3 MOI 0.1 | -0.2 | -0.8 | compare |
| r2a control | R2A control | -1.1 | -5.0 | compare |
| R2A control | +0.6 | +2.7 | compare |
| R2A control | +0.2 | +1.0 | compare |
| replicable vector efficiency | Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 | +0.2 | +0.6 | compare |
| Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 | +0.4 | +2.5 | compare |
| stress | Bacitracin 0.125 mg/ml | +0.3 | +1.4 | compare |
| Bacitracin 0.25 mg/ml | +0.9 | +3.5 | compare |
| Benzethonium chloride 0.0016 mM | +0.0 | +0.1 | compare |
| Cephalothin 2 mg/ml | -0.2 | -1.3 | compare |
| Cobalt chloride 0.25 mM | -0.0 | -0.0 | compare |
| Dimethyl Sulfoxide 6 vol% | -0.1 | -0.6 | compare |
| Lomefloxacin 0.001 mM | +0.0 | +0.0 | compare |
| A22 0.005 mg/ml | -0.1 | -0.6 | compare |
| Nickel (II) chloride 0.5 mM | +0.3 | +1.9 | compare |
| Nickel (II) chloride 1 mM | +0.0 | +0.0 | compare |
| Paraquat dichloride 0.032 mg/ml | -0.4 | -1.9 | compare |
| Paraquat dichloride 0.064 mg/ml | -0.1 | -0.7 | compare |
| Polymyxin B sulfate 0.0625 mg/ml | -0.0 | -0.3 | compare |
| Chloride 200 mM | +0.1 | +0.5 | compare |
| Thallium(I) acetate 0.01 mg/ml | -0.2 | -0.8 | compare |
| Zinc 0.5 mM | -0.3 | -1.6 | compare |
| supernatant | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB | +0.1 | +0.4 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB | +0.3 | +1.1 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB | -0.4 | -1.1 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X | +0.5 | +2.4 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X | +0.1 | +0.7 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB | +0.3 | +1.2 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB | -0.2 | -0.7 | compare |
| Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X | +0.3 | +1.1 | compare |
| Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X | +0.0 | +0.2 | compare |
| Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X | +0.0 | +0.2 | compare |
| Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X | -0.1 | -0.7 | compare |
| supernatant control | Vogels_fungal_media 0.1X | +0.0 | +0.2 | compare |
| Vogels_fungal_media 0.1X | +0.1 | +0.3 | compare |
| Vogels_fungal_media; pH 5.5 | +0.5 | +2.6 | compare |
| Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB | +0.3 | +1.2 | compare |
| supernatant control:fungal media | R2A with Vogels_fungal_media 0.2X | +0.1 | +0.6 | compare |
| R2A with Vogels_fungal_media 0.8X | -0.6 | -3.0 | compare |
| R2A with Vogels_fungal_media 0.8X | -0.5 | -1.9 | compare |
| R2A with Vogels_fungal_media 0.8X | +0.0 | +0.2 | compare |
| R2A with Vogels_fungal_media 0.8X | -0.1 | -0.3 | compare |
| temperature | LB 37C | +0.2 | +1.2 | compare |
| LB 37C | +0.2 | +0.9 | compare |
| LB, 23C | +0.2 | +0.9 | compare |
| LB, 23C | +0.3 | +2.0 | compare |
| LB, 30C | -0.1 | -0.6 | compare |
| LB, 37C | -0.1 | -0.5 | compare |
| tn7 efficiency | Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 | +0.1 | +0.7 | compare |
| Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 | +0.3 | +2.1 | compare |
| Outgrowth after Tn7 transformation | -0.1 | -0.5 | compare |
| Outgrowth after Tn7 transformation | -0.1 | -0.5 | compare |
| vitamin | No vitamins t1 | +0.0 | +0.3 | compare |
| No vitamins t2 | +0.5 | +2.8 | compare |
| With vitamins t1 | +0.2 | +0.8 | compare |
| With vitamins t2 | +0.5 | +2.0 | compare |