Fitness data for BPHYT_RS18620 in Burkholderia phytofirmans PsJN

transcriptional regulator
SEED: Predicted transcription regulator, contains HTH domain (MarR family)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -2.1 -4.4 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -2.0 -4.1 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -2.0 -3.9 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.7 -5.1 compare
carbon source L-Glutamine (C) -1.7 -5.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -4.9 compare
carbon source D-Alanine (C) -1.0 -3.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -3.2 compare
carbon source L-Asparagine (C) -1.0 -4.0 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.0 -3.6 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -0.9 -3.2 compare
carbon source 2-Deoxy-D-Ribose (C) -0.9 -3.4 compare
carbon source L-Histidine (C) -0.9 -4.5 compare
carbon source Putrescine (C) -0.8 -3.6 compare
carbon source pyruvate (C) -0.8 -3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.4 +1.4 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +1.5 +5.2 compare
carbon source Disodium Glutarate (C) +1.8 +7.8 compare
carbon source Disodium Glutarate (C) +1.8 +5.3 compare