Fitness data for BPHYT_RS18615 in Burkholderia phytofirmans PsJN

5-formyltetrahydrofolate cyclo-ligase
SEED: 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source L-Tryptophan (C) -1.3 -4.1 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -1.2 -3.2 compare
nitrogen source L-Lysine (N) -1.1 -3.0 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -1.1 -2.1 compare
carbon source Gly-Glu (C) -1.0 -3.9 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.0 -3.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days -0.9 -2.7 compare
carbon source L-Arginine (C) -0.9 -3.7 compare
carbon source L-Histidine (C) -0.9 -4.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.9 -2.4 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.2 compare
carbon source NAG (C) -0.9 -3.2 compare
carbon source propionate (C) -0.8 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -3.1 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -2.8 compare
carbon source D-Galacturonic Acid (C) -0.8 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +2.2 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +1.4 +4.7 compare