Fitness data for BPHYT_RS16955 in Burkholderia phytofirmans PsJN

IclR family transcriptional regulator
SEED: D-galactonate regulator, IclR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Galactose (C) -3.1 -10.6 compare
carbon source L-Arabinose (C) -0.6 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.2 compare
nophagecontrol 24hr Phyto Lib only -0.3 -1.5 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.3 -1.4 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -0.3 -1.8 compare
phage P. phyto PHYTO2 MOI 1 +0.3 +1.2 compare
carbon source D-Glucose (C) +0.3 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.3 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.4 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.4 +1.6 compare
carbon source Disodium Glutarate (C) +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.8 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.4 +1.4 compare
temperature LB, 30C +0.4 +2.7 compare
phage 24hr PHYTO3 MOI 10 +0.4 +1.6 compare
carbon source Disodium Glutarate (C) +0.4 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.0 compare