Fitness data for BPHYT_RS16920 in Burkholderia phytofirmans PsJN

L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data)
Original annotation: 3-oxoacyl-ACP reductase
SEED: Putative oxidoreductase in arabinose utilization cluster

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-Arabinose (C) -2.3 -7.0 compare
carbon source D-Galactose (C) -2.1 -5.7 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.1 -3.7 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.7 -2.0 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.6 -1.6 compare
phage 36hr PHYTO2 MOI 1 -0.6 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.3 compare
phage 36hr PHYTO9 MOI 1 -0.5 -2.0 compare
phage 24hr PHYTO11 MOI 1 -0.4 -2.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.9 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.9 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.4 +1.6 compare
phage 24hr PHYTO10 MOI 10 +0.4 +1.4 compare
carbon source propionate (C) +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.2 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.5 +2.4 compare
carbon source D-Galacturonic Acid (C) +0.5 +4.1 compare
phage 24hr PHYTO6 MOI 0.1 +0.6 +3.2 compare