Fitness data for BPHYT_RS16505 in Burkholderia phytofirmans PsJN

HAD family hydrolase
SEED: Hydrolase in polyol utilization gene cluster, haloacid dehalogenase-like family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source D-Glucosamine Hydrochloride (C) -2.0 -6.0 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.9 -2.3 compare
nitrogen source L-Serine (N) -0.9 -1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.9 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.0 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.7 -1.0 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.7 -1.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.7 -1.6 compare
carbon source L-Arabinose (C) +0.7 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.5 compare
stress Polymyxin B sulfate 0.0625 mg/ml +0.7 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.7 +1.7 compare
nophagecontrol 24hr Phyto Lib Only +0.8 +1.7 compare
motility inner cut, LB soft agar motility assay +0.8 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.8 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +0.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.9 +2.0 compare
phage 24hr PHYTO3 MOI 10 +1.0 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days +1.0 +2.4 compare