Fitness data for BPHYT_RS16105 in Burkholderia phytofirmans PsJN

ABC transporter for D-Sorbitol, permease component 1 (from data)
Original annotation: mannitol ABC transporter permease
SEED: Various polyols ABC transporter, permease component 2
KEGG: sorbitol/mannitol transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Sorbitol (C) -3.5 -7.6 compare
phage 36hr PHYTO9 MOI 1 -0.6 -2.3 compare
phage 24hr PHYTO7 MOI 1 -0.5 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.9 compare
phage 36hr PHYTO11 MOI 1 -0.4 -1.5 compare
stress Bacitracin 0.25 mg/ml -0.3 -1.6 compare
phage 24hr PHYTO4 MOI 10 -0.3 -1.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.4 +1.6 compare
carbon source Dodecandioic (C) +0.4 +2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.4 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.3 compare
carbon source propionate (C) +0.5 +2.2 compare
carbon source D-Xylose (C) +0.5 +2.5 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.5 +2.8 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.6 compare