Fitness data for BPHYT_RS13750 in Burkholderia phytofirmans PsJN

D-2-hydroxyacid dehydrogenase
SEED: D-2-hydroxyglutarate dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress Nickel (II) chloride 1 mM -0.8 -4.9 compare
carbon source Phenylacetic 5 mM (C) -0.7 -2.5 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.7 -2.2 compare
motility inner cut, LB soft agar motility assay -0.5 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.6 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.5 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.5 +2.0 compare
phage 36hr PHYTO11 MOI 1 +0.5 +2.0 compare
carbon source Protocatechuic Acid (C) +0.5 +1.9 compare
phage P. phyto corn MOI 1 +0.5 +2.2 compare
nophagecontrol 24hr Phyto Lib Only +0.5 +1.7 compare
nitrogen source L-Asparagine (N) +0.5 +2.2 compare
phage 24hr PHYTO1 MOI 10 +0.5 +1.7 compare
phage 24hr PHYTO2 MOI 0.1 +0.5 +2.0 compare
phage 36hr PHYTO3 MOI 1 +0.5 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.2 compare
nitrogen source L-Alanine (N) +0.6 +3.9 compare
phage 24hr PHYTO MOI 0.1 +0.6 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.7 +2.4 compare