Fitness data for BPHYT_RS13515 in Burkholderia phytofirmans PsJN

3-isopropylmalate dehydratase small subunit
SEED: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
KEGG: 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage 36hr PHYTO1 MOI 10 -1.3 -3.1 compare
phage 36hr PHYTO1 MOI 10 -1.3 -2.6 compare
phage 36hr PHYTO2 MOI 1 -0.9 -1.1 compare
nophagecontrol 36hr Phyto Lib Only -0.8 -1.8 compare
phage 36hr PHYTO8 MOI 10 -0.8 -1.6 compare
nophagecontrol 36hr Phyto Lib Only -0.8 -2.2 compare
phage 24hr PHYTO6 MOI 1 -0.7 -1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.7 -2.1 compare
phage P. phyto PHYTO2 MOI 1 -0.7 -1.3 compare
carbon source Phenylacetic 5 mM (C) +0.7 +1.0 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.7 +1.6 compare
supernatant control Vogels_fungal_media 0.1X +0.8 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.8 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.9 +2.1 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.9 +1.2 compare
nitrogen source L-Glutamic (N) +0.9 +2.6 compare
carbon source D-Galacturonic Acid (C) +0.9 +2.7 compare
carbon source Tween 20 (C) +1.0 +3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +1.0 +2.8 compare