Fitness data for BPHYT_RS13315 in Burkholderia phytofirmans PsJN

dihydropyrimidine dehydrogenase subunit A
SEED: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
KEGG: glutamate synthase (NADPH/NADH) small chain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
nitrogen source Uridine (N) -3.5 -3.6 compare
phage 36hr PHYTO7 MOI 1 -1.9 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.6 -1.8 compare
phage 36hr PHYTO3 MOI 1 -1.5 -1.2 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.4 -1.4 compare
phage 36hr PHYTO3 MOI 1 -1.4 -1.2 compare
phage 36hr PHYTO1 MOI 10 -1.4 -1.4 compare
phage 24hr PHYTO3 MOI 10 -1.3 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3 -1.7 compare
phage 24hr PHYTO10 MOI 10 -1.1 -1.1 compare
carbon source Protocatechuic Acid (C) -1.1 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -1.1 -0.9 compare
carbon source D-Glucose (C) -1.1 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.1 -1.4 compare
carbon source adipate (C) -1.1 -1.5 compare
phage 36hr PHYTO11 MOI 1 -1.0 -1.1 compare
phage P. phyto PHYTO2 MOI 1 -1.0 -0.8 compare
vitamin No vitamins t2 +1.0 +2.0 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +1.8 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +2.2 +2.1 compare