Fitness data for BPHYT_RS13220 in Burkholderia phytofirmans PsJN

phosphomethylpyrimidine synthase
SEED: Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17)
KEGG: thiamine biosynthesis protein ThiC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.8)


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group condition fitness t score  
vitamin No vitamins t2 -5.9 -5.7 compare
nitrogen source L-Alanine (N) -5.8 -7.3 compare
carbon source L-Phenylalanine (C) -5.8 -6.1 compare
carbon source Tween 20 (C) -5.7 -6.2 compare
carbon source L-Fucose (C) -5.4 -6.3 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -5.3 -4.7 compare
carbon source m-Inositol (C) -5.2 -9.8 compare
supernatant control Vogels_fungal_media 0.1X -4.8 -5.8 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -4.7 -6.1 compare
vitamin With vitamins t2 -4.6 -6.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -4.5 -5.5 compare
supernatant control Vogels_fungal_media; pH 5.5 -4.4 -4.3 compare
carbon source L-Tryptophan (C) -4.4 -10.5 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -4.2 -4.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -4.0 -7.4 compare
carbon source Dodecandioic (C) -4.0 -4.6 compare
nitrogen source L-Proline (N) -4.0 -7.1 compare
carbon source D-Gluconic Acid (C) -3.9 -12.2 compare
nitrogen source L-Lysine (N) -3.8 -7.0 compare
carbon source pyruvate (C) -3.8 -9.1 compare