Fitness data for BPHYT_RS12705 in Burkholderia phytofirmans PsJN

DNAase
SEED: Putative deoxyribonuclease YjjV
KEGG: TatD DNase family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.6 -2.0 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.5 -1.7 compare
phage 36hr PHYTO8 MOI 10 -0.4 -1.4 compare
nitrogen source Uridine (N) +0.4 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.0 compare
nitrogen source L-Proline (N) +0.4 +1.7 compare
carbon source D-Glucose (C) +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.4 compare
carbon source D-Mannose (C) +0.4 +2.8 compare
nitrogen source Putrescine (N) +0.4 +1.3 compare
motility inner cut, LB soft agar motility assay +0.4 +1.7 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.4 +1.4 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.6 compare
stress Nickel (II) chloride 1 mM +0.5 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +2.5 compare
nitrogen source L-Glutamine (N) +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.3 compare
phage P. phyto PHYTO2 MOI 1 +0.6 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.8 compare
motility outer cut, LB soft agar motility assay +0.8 +1.7 compare